ISMARA results for rna-seq-hg19

ISMARA - Integrated System for Motif Actitivity Response Analysis is a free online tool that recognizes most important transcription factors that are changing their activity in a set of samples.

All motifs sorted by activity significance

Motif name Z-value Associated genes Profile Logo
NRF1.p2 4.763 NRF1 (EWG, ALPHA-PAL)
ELK1,4_GABP{A,B1}.p3 4.609 GABPA (E4TF1A, NFT2, NRF2, E4TF1-60, NRF2A)
GABPB1 (E4TF1-47, GABPB)
ELK4 (SAP1)
ELK1
NFY{A,B,C}.p2 4.289 NFYC (CBF-C)
NFYB (CBF-A, HAP3)
NFYA (HAP2, CBF-B)
ZNF143.p2 4.170 ZNF143 (SBF, pHZ-1, STAF)
E2F1..5.p2 3.773 E2F4 (E2F-4)
E2F5
E2F2 (E2F-2)
E2F1 (RBP3)
E2F3
YY1.p2 3.601 YY1 (NF-E1, DELTA, UCRBP, YIN-YANG-1, INO80S)
FOX{D1,D2}.p2 3.199 FOXD2 (FREAC9)
FOXD1 (FREAC4)
IRF1,2,7.p3 3.050 IRF1 (MAR, IRF-1)
IRF2 (IRF-2, DKFZp686F0244)
IRF7 (IRF7A, IRF-7H)
TFDP1.p2 3.024 TFDP1 (Dp-1, DRTF1, DP1)
KLF4.p3 2.860 KLF4 (EZF, GKLF)
bHLH_family.p2 2.766 ARNTL (MOP3, JAP3, BMAL1, PASD3, bHLHe5)
MITF (WS2A, MI, bHLHe32)
MXI1 (MXD2, MAD2, MXI, bHLHc11)
TFE3 (TFEA, bHLHe33)
CLOCK (KIAA0334, KAT13D, bHLHe8)
OLIG2 (RACK17, OLIGO2, bHLHe19)
MXD4 (MAD4, MSTP149, MST149, bHLHc12)
HEY2 (bHLHb32)
HEY1 (HESR-1, CHF2, HESR1, HRT-1, CHF-2, HERP2, BHLHb31)
HEYL (bHLHb33)
MLXIPL (WS-bHLH, MIO, CHREBP, MONDOB)
HES6 (bHLHc23)
MXD3 (MAD3, bHLHc13)
ARNTL2 (BMAL2, MOP9, CLIF, PASD9, bHLHe6)
ID1 (dJ857M17.1.2, bHLHb24)
MNT (ROX, MXD6, MAD6, bHLHd3)
OLIG1 (BHLHB6, bHLHe21)
NPAS2 (MOP4, PASD4, bHLHe9)
SRF.p3 2.762 SRF (MCM1)
TBP.p2 2.697 TBP (TFIID)
EHF.p2 2.591 EHF
AHR_ARNT_ARNT2.p2 2.544 ARNT (HIF-1beta, bHLHe2)
AHR
ARNT2 (KIAA0307, bHLHe1)
SP1.p2 2.459 SP1
FOS_FOS{B,L1}_JUN{B,D}.p2 2.405 FOS (c-fos, AP-1)
JUNB
FOSL1 (fra-1)
JUND (AP-1)
FOSB (G0S3, GOSB, GOS3, AP-1, MGC42291, DKFZp686C0818)
GTF2I.p2 2.394 GTF2I (TFII-I, BAP-135, SPIN, BTKAP1, DIWS, IB291)
KLF12.p2 2.373 KLF12 (AP-2rep, HSPC122, AP2REP)
PRDM1.p3 2.328 PRDM1 (PRDI-BF1)
UUUUUGC 2.312 hsa-miR-129-5p
GATA1..3.p2 2.305 GATA1 (ERYF1, NFE1)
GATA2 (NFE1B)
GATA3 (HDR)
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2 2.256 ARNT (HIF-1beta, bHLHe2)
MAX (bHLHd4)
MYC (c-Myc, bHLHe39)
USF1 (UEF, MLTFI, bHLHb11)
BHLHB2 (DEC1, bHLHe40)
ARNT2 (KIAA0307, bHLHe1)
RREB1.p2 2.232 RREB1 (HNT)
NFKB1_REL_RELA.p2 2.208 RELA (p65)
REL (I-Rel)
NFKB1 (KBF1, p105)
GATA6.p2 2.207 GATA6
ELF1,2,4.p2 2.207 ELF2 (EU32, NERF, NERF-2, NERF-1A, NERF-1B)
ELF1
ELF4 (MEF, ELFR)
TGIF1.p2 2.174 TGIF1
TFAP2B.p2 2.168 TFAP2B (AP2-B)
PRRX1,2.p2 2.130 PRRX2 (PRX2, PMX2)
PRRX1 (PHOX1)
HIC1.p2 2.075 HIC1 (ZBTB29)
ZNF384.p2 2.067 ZNF384 (CAGH1A, CIZ, NMP4, NP)
ATF5_CREB3.p2 2.058 ATF5
CREB3 (LZIP, Luman)
HNF4A_NR2F1,2.p2 2.054 NR2F1 (EAR-3, COUP-TFI, TCFCOUP1, SVP44)
NR2F2 (COUP-TFII, COUPTFB, SVP40)
HNF4A (NR2A1, HNF4)
HBP1_HMGB_SSRP1_UBTF.p2 2.046 HMGB2
HMGB3 (HMG2A, MGC90319)
SSRP1 (FACT80)
UBTF (UBF, NOR-90)
HBP1
CTCF.p2 2.021 CTCF
RUNX1..3.p2 1.986 RUNX1 (PEBP2A2, AMLCR1)
RUNX3 (AML2, PEBP2A3)
RUNX2 (AML3, PEBP2A1, PEBP2aA1)
HES1.p2 1.960 HES1 (FLJ20408, HES-1, Hes1, bHLHb39)
MYFfamily.p2 1.947 MYOD1 (PUM, MYOD, bHLHc1)
MYF6 (MRF4, bHLHc4)
MYF5 (bHLHc2)
MYOG (bHLHc3)
POU2F1..3.p2 1.922 POU2F2 (OCT2)
POU2F1 (OCT1)
POU2F3 (OCT11, PLA-1, Skn-1a, Epoc-1)
TFAP2{A,C}.p2 1.912 TFAP2C (AP2-GAMMA, ERF1, TFAP2G, hAP-2g)
TFAP2A (AP-2)
MZF1.p2 1.911 MZF1 (MZF1B, ZSCAN6, MZF-1, Zfp98)
TFCP2.p2 1.905 TFCP2 (CP2, LSF, LBP-1C, TFCP2C)
MTF1.p2 1.886 MTF1
TFEB.p2 1.868 TFEB
ZFP161.p2 1.845 ZFP161 (ZNF478, ZBTB14)
TCF4_dimer.p2 1.831 TCF4 (E2-2, ITF2, PTHS, SEF2, SEF2-1, SEF2-1A, SEF2-1B, bHLHb19, MGC149723, MGC149724)
SPI1.p2 1.827 SPI1 (PU.1, SPI-A, OF, SFPI1, SPI-1)
GGAAUGU 1.825 hsa-miR-1
hsa-miR-206
hsa-miR-613
NFE2L2.p2 1.821 NFE2L2 (NRF2)
NR5A1,2.p2 1.820 NR5A1 (FTZ1, SF-1, ELP, AD4BP)
NR5A2 (FTZ-F1beta, hB1F, LRH-1, FTZ-F1, hB1F-2, B1F2)
PITX1..3.p2 1.799 PITX2 (IGDS, RS, Brx1, Otlx2, ARP1)
PITX3
PITX1 (PTX1, POTX)
AAGGCAC 1.777 hsa-miR-124
hsa-miR-506
UCAAGUA 1.767 hsa-miR-26a
hsa-miR-26b
hsa-miR-1297
hsa-miR-4465
HOX{A6,A7,B6,B7}.p2 1.760 HOXB6
HOXA7
HOXB7
HOXA6
XBP1.p3 1.752 XBP1
MYB.p2 1.746 MYB (c-myb)
PAX5.p2 1.734 PAX5 (BSAP)
HMGA1,2.p2 1.723 HMGA1
HMGA2 (BABL, LIPO)
GFI1.p2 1.715 GFI1
ZBTB16.p2 1.700 ZBTB16 (PLZF)
SMAD1..7,9.p2 1.688 SMAD5 (Dwfc, JV5-1)
SMAD1 (MADR1, JV4-1)
SMAD3 (JV15-2, HsT17436)
SMAD4 (DPC4)
SMAD2 (MADR2, JV18-1)
SMAD6 (HsT17432)
SMAD7
SMAD9
REST.p3 1.687 REST (NRSF, XBR)
EN1,2.p2 1.685 EN1
EN2
EGR1..3.p2 1.674 EGR3 (PILOT)
EGR1 (TIS8, G0S30, NGFI-A, KROX-24, ZIF-268, AT225, ZNF225)
EGR2
STAT2,4,6.p2 1.665 STAT2 (STAT113)
STAT4
STAT6 (D12S1644, IL-4-STAT)
NFATC1..3.p2 1.664 NFATC3 (NFAT4, NFATX)
NFATC2 (NF-ATP, NFATp, NFAT1)
NFATC1 (NF-ATC, NFATc, NFAT2)
POU5F1.p2 1.663 POU5F1 (OCT3, Oct4, MGC22487)
GLI1..3.p2 1.662 GLI1
GLI2 (THP2, HPE9, THP1)
GLI3 (PAP-A, PAPA, PAPA1, PAPB, ACLS, PPDIV)
PAX2.p2 1.660 PAX2
ZNF148.p2 1.645 ZNF148 (BERF-1, ZBP-89, BFCOL1, HT-BETA, ZFP148, pHZ-52)
MAZ.p2 1.635 MAZ (ZF87, Pur-1, Zif87, ZNF801)
MEF2{A,B,C,D}.p2 1.634 MEF2A (RSRFC4, RSRFC9)
MEF2C
MEF2D
MEF2BNB-MEF2B (MEF2B, LOC729991-MEF2B)
MEF2B (RSRFR2, FLJ32648)
MAFB.p2 1.614 MAFB
HAND1,2.p2 1.606 HAND1 (eHand, Thing1, Hxt, bHLHa27)
HAND2 (dHand, Thing2, Hed, bHLHa26)
AAUACUG 1.588 hsa-miR-200b
hsa-miR-200c
hsa-miR-429
SPZ1.p2 1.576 SPZ1 (NYD-TSP1, FLJ25709)
UGAAAUG 1.559 hsa-miR-203
NR4A2.p2 1.556 NR4A2 (NOT, RNR1, HZF-3, NURR1, TINUR)
HOX{A5,B5}.p2 1.538 HOXB5
HOXA5
GTF2A1,2.p2 1.515 GTF2A1 (TFIIA)
GTF2A2 (TFIIA, HsT18745)
UGUGCUU 1.491 hsa-miR-218
TEAD1.p2 1.481 TEAD1 (TEF-1)
TEAD2 (ETF, TEF4, TEF-4, TEAD-2)
TEAD3 (TEF5, TEAD5, TEF-5, DTEF-1, ETFR-1, TEAD-3)
TEAD4 (TEF3, RTEF1, TEF-3, EFTR-2, TEFR-1, TCF13L1, hRTEF-1B)
HIF1A.p2 1.475 HIF1A (MOP1, HIF-1alpha, PASD8, HIF1)
CAGCAGG 1.474 hsa-miR-214
hsa-miR-761
hsa-miR-3619-5p
UCCAGUU 1.471 hsa-miR-145
RXR{A,B,G}.p2 1.471 RXRA (NR2B1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
MYOD1.p2 1.463 MYOD1 (PUM, MYOD, bHLHc1)
DBP.p2 1.458 DBP (DABP)
HSF1,2.p2 1.446 HSF1 (HSTF1)
HSF2
EVI1.p2 1.442 EVI1 (MDS1-EVI1, PRDM3)
SPIB.p2 1.440 SPIB (SPI-B)
ESRRA.p2 1.434 ESRRA (ERR1, ERRalpha, NR3B1, ERRa)
CREB1.p2 1.430 CREB1
FOSL2.p2 1.385 FOSL2 (FRA2, FLJ23306)
SREBF1,2.p2 1.376 SREBF1 (SREBP1, bHLHd1)
SREBF2 (SREBP2, bHLHd2)
NANOG.p2 1.374 NANOG (FLJ12581, FLJ40451)
LMO2.p2 1.372 LMO2 (TTG2, RHOM2, RBTN2)
CDX1,2,4.p2 1.367 CDX1
CDX2
CDX4
TLX1..3_NFIC{dimer}.p2 1.365 TLX1
TLX3 (RNX)
HNF1A.p2 1.348 HNF1A (HNF1, LFB1)
HLF.p2 1.348 HLF (MGC33822)
JUN.p2 1.336 JUN (c-Jun, AP-1)
JUND (AP-1)
JUNB
ACAUUCA 1.336 hsa-miR-181a
hsa-miR-181b
hsa-miR-181c
hsa-miR-181d
hsa-miR-4262
TLX2.p2 1.326 TLX2 (Enx, Tlx2, NCX)
NKX2-2,8.p2 1.322 NKX2-2 (NKX2.2)
NKX2-8 (NKX2.8, Nkx2-9)
FEV.p2 1.310 FEV (PET-1, HSRNAFEV)
AACACUG 1.306 hsa-miR-141
hsa-miR-200a
TFAP4.p2 1.294 TFAP4 (AP-4)
ZEB1.p2 1.260 ZEB1 (BZP, ZEB, AREB6, NIL-2-A, Zfhep, Zfhx1a)
SNAI1..3.p2 1.255 SNAI2 (SLUGH1)
SNAI1 (SNA, SLUGH2, SNAH)
SNAI3 (SMUC, Zfp293)
PBX1.p2 1.245 PBX1
ATF4.p2 1.234 ATF4 (TAXREB67, CREB-2)
SOX2.p2 1.232 SOX2
PATZ1.p2 1.230 PATZ1 (MAZR, dJ400N23, ZBTB19, ZSG, RIAZ, PATZ)
ESR1.p2 1.223 ESR1 (NR3A1, Era)
IKZF1.p2 1.215 IKZF1 (hIk-1, LyF-1, Hs.54452, IKAROS)
AAAGUGC 1.212 hsa-miR-17
hsa-miR-20a
hsa-miR-20b
hsa-miR-93
hsa-miR-106a
hsa-miR-106b
hsa-miR-519d
CCCUGAG 1.206 hsa-miR-125a-5p
hsa-miR-125b
hsa-miR-4319
NFIX.p2 1.205 NFIX (NF1A)
NFE2L1.p2 1.203 NFE2L1 (NRF1, LCR-F1, FLJ00380, TCF11)
CACAGUG 1.195 hsa-miR-128
ONECUT1,2.p2 1.190 ONECUT2 (OC-2)
ONECUT1 (HNF-6)
ZBTB6.p2 1.173 ZBTB6 (ZID)
EOMES.p2 1.173 EOMES (TBR2)
NHLH1,2.p2 1.166 NHLH1 (NSCL, NSCL1, bHLHa35)
NHLH2 (NSCL2, bHLHa34)
EP300.p2 1.163 EP300 (p300, KAT3B)
STAT5{A,B}.p2 1.163 STAT5B
STAT5A (MGF)
SOX5.p2 1.144 SOX5 (L-SOX5, MGC35153)
FOX{I1,J2}.p2 1.135 FOXI1 (FREAC6)
FOXJ2 (FHX)
FOXA2.p3 1.131 FOXA2
NKX6-1,2.p2 1.123 NKX6-1 (Nkx6.1)
NKX6-2 (NKX6B, GTX, NKX6.1)
GUGCAAA 1.112 hsa-miR-19a
hsa-miR-19b
DMAP1_NCOR{1,2}_SMARC.p2 1.103 SMARCA1 (SNF2LB, NURF140, ISWI, SWI)
SMARCC2 (BAF170, Rsc8, CRACC2)
SMARCA5 (hSNF2H, hISWI, ISWI)
NCOR1 (N-CoR, hCIT529I10, TRAC1, hN-CoR, KIAA1047, MGC104216)
NCOR2 (SMRT, SMRTE, TRAC-1, CTG26, TNRC14)
DMAP1 (DNMAP1, FLJ11543, KIAA1425, DNMTAP1, EAF2, SWC4)
BPTF.p2 1.102 BPTF (FAC1, NURF301)
SRY.p2 1.102 SRY (TDF)
NKX2-3_NKX2-5.p2 1.096 NKX2-5 (CSX1, NKX2.5, NKX4-1)
NKX2-3 (NKX2.3, CSX3, NKX4-3)
FOXD3.p2 1.093 FOXD3 (Genesis, HFH2)
POU5F1_SOX2{dimer}.p2 1.085 POU5F1 (OCT3, Oct4, MGC22487)
SOX2
LEF1_TCF7_TCF7L1,2.p2 1.084 TCF7 (TCF-1)
TCF7L2 (TCF-4)
LEF1 (TCF1ALPHA)
TCF7L1
GAGGUAG 1.082 hsa-let-7a
hsa-let-7b
hsa-let-7c
hsa-let-7d
hsa-let-7e
hsa-let-7f
hsa-let-7g
hsa-let-7i
hsa-miR-98
hsa-miR-4458
hsa-miR-4500
GUAAACA 1.080 hsa-miR-30a
hsa-miR-30b
hsa-miR-30c
hsa-miR-30d
hsa-miR-30e
BACH2.p2 1.072 BACH2
GCUGGUG 1.071 hsa-miR-138
ADNP_IRX_SIX_ZHX.p2 1.068 SIX5
ZHX1
IRX4
ADNP (KIAA0784, ADNP1)
ZHX3 (KIAA0395)
ZHX2 (KIAA0854)
IRX5 (IRX-2a)
SIX2
TBX4,5.p2 1.056 TBX5
TBX4
RFX1..5_RFXANK_RFXAP.p2 1.046 RFX1 (EF-C)
RFXAP
RFX5
RFXANK (BLS, RFX-B, ANKRA1, F14150_1, MGC138628)
RFX4
RFX3
RFX2 (FLJ14226)
IKZF2.p2 1.042 IKZF2 (Helios)
LHX3,4.p2 1.023 LHX3
LHX4 (Gsh4)
UAUUGCU 1.016 hsa-miR-137
EBF1.p2 1.014 EBF1 (OLF1)
ZNF423.p2 1.012 ZNF423 (KIAA0760, OAZ, Roaz, Ebfaz, Zfp104)
NANOG{mouse}.p2 1.011 NANOG (FLJ12581, FLJ40451)
GUAGUGU 1.011 hsa-miR-142-3p
FOXL1.p2 1.006 FOXL1 (FREAC7, FKH6)
GGCUCAG 0.995 hsa-miR-24
ETS1,2.p2 0.993 ETS2
ETS1 (FLJ10768, ETS-1)
NKX3-2.p2 0.988 NKX3-2 (NKX3B, NKX3.2)
ZIC1..3.p2 0.979 ZIC1 (ZIC, ZNF201)
ZIC2 (HPE5)
ZIC3 (HTX, ZNF203)
CUUUGGU 0.966 hsa-miR-9
HOX{A4,D4}.p2 0.952 HOXA4
HOXD4
NFE2.p2 0.945 NFE2 (NF-E2)
HMX1.p2 0.944 HMX1 (H6, NKX5-3)
AGCAGCA 0.943 hsa-miR-15a
hsa-miR-15b
hsa-miR-16
hsa-miR-195
hsa-miR-424
hsa-miR-497
RXRA_VDR{dimer}.p2 0.941 VDR (NR1I1)
ATF6.p2 0.939 ATF6 (ATF6A)
FOXN1.p2 0.933 FOXN1 (FKHL20)
NR3C1.p2 0.925 NR3C1 (GR)
AGCACCA 0.915 hsa-miR-29a
hsa-miR-29b
hsa-miR-29c
TP53.p2 0.909 TP53 (p53, LFS1)
ACAGUAU 0.893 hsa-miR-144
POU1F1.p2 0.890 POU1F1 (GHF-1)
SOX17.p2 0.887 SOX17
SOX{8,9,10}.p2 0.875 SOX9 (SRA1)
SOX8
SOX10 (DOM, WS4, WS2E)
AGCAGCG 0.872 hsa-miR-503
PAX4.p2 0.872 PAX4
MYBL2.p2 0.861 MYBL2 (BMYB, B-MYB)
CDC5L.p2 0.852 CDC5L (PCDC5RP, hCDC5, CEF1)
NKX3-1.p2 0.844 NKX3-1 (NKX3.1, BAPX2)
FOXO1,3,4.p2 0.842 FOXO1 (FKH1)
FOXO4 (AFX1)
FOXO3 (AF6q21, FOXO2)
GGCAGUG 0.839 hsa-miR-34a
hsa-miR-34c-5p
hsa-miR-449a
hsa-miR-449b
T.p2 0.830 T
UGCAUUG 0.823 hsa-miR-33a
hsa-miR-33b
PPARG.p2 0.813 PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
AUUGCAC 0.811 hsa-miR-25
hsa-miR-32
hsa-miR-92a
hsa-miR-92b
hsa-miR-363
hsa-miR-367
ZNF238.p2 0.808 ZNF238 (C2H2-171, TAZ-1, RP58, ZBTB18)
UUGUUCG 0.798 hsa-miR-375
CCAGUGU 0.798 hsa-miR-199a-5p
hsa-miR-199b-5p
GUCAGUU 0.786 hsa-miR-223
AGGUAGU 0.773 hsa-miR-196a
hsa-miR-196b
AAGGUGC 0.773 hsa-miR-18a
hsa-miR-18b
hsa-miR-4735-3p
ALX1.p2 0.770 ALX1
UCACAGU 0.764 hsa-miR-27a
hsa-miR-27b
CEBPA,B_DDIT3.p2 0.759 DDIT3 (CHOP10, GADD153, CHOP)
CEBPA (C/EBP-alpha)
CEBPB (LAP, CRP2, NFIL6, IL6DBP)
FOX{F1,F2,J1}.p2 0.758 FOXF2 (FREAC2)
FOXJ1 (HFH-4, HFH4)
FOXF1 (FREAC1)
AGUGCAA 0.758 hsa-miR-130a
hsa-miR-130b
hsa-miR-301a
hsa-miR-301b
hsa-miR-454
hsa-miR-3666
hsa-miR-4295
UUGGCAA 0.756 hsa-miR-182
RXRG_dimer.p3 0.752 NR1H2 (NER, NER-I, RIP15, LXR-b)
RXRA (NR2B1)
PPARG (PPARG1, PPARG2, NR1C3, PPARgamma)
PPARA (hPPAR, NR1C1)
RXRB (NR2B2, H-2RIIBP, RCoR-1)
RXRG (NR2B3)
AGCUGCC 0.748 hsa-miR-22
UGCAUAG 0.748 hsa-miR-153
GFI1B.p2 0.747 GFI1B
AUGGCUU 0.743 hsa-miR-135a
hsa-miR-135b
UCCCUUU 0.742 hsa-miR-204
hsa-miR-211
RBPJ.p2 0.734 RBPJ (SUH, IGKJRB, RBPJK, KBF2, RBP-J, CBF1)
FOXP3.p2 0.727 FOXP3 (JM2, XPID, AIID, PIDX, DIETER, SCURFIN)
NKX2-1,4.p2 0.727 NKX2-1 (TTF-1)
NKX2-4 (NKX2.4)
CCUUCAU 0.727 hsa-miR-205
CRX.p2 0.715 CRX (CRD, LCA7, OTX3)
POU6F1.p2 0.707 POU6F1 (BRN5, MPOU, TCFB1)
STAT1,3.p3 0.705 STAT1 (STAT91, ISGF-3)
STAT3 (APRF)
FOXQ1.p2 0.705 FOXQ1 (HFH1)
MSX1,2.p2 0.704 MSX1 (HYD1, OFC5)
MSX2 (CRS2, FPP, HOX8, MSH, PFM)
AAGUGCU 0.703 hsa-miR-302a
hsa-miR-302b
hsa-miR-302c
hsa-miR-302d
hsa-miR-302e
hsa-miR-372
hsa-miR-373
hsa-miR-520a-3p
hsa-miR-520b
hsa-miR-520c-3p
hsa-miR-520d-3p
hsa-miR-520e
NR1H4.p2 0.701 NR1H4 (FXR, RIP14, HRR1, HRR-1)
FOX{C1,C2}.p2 0.698 FOXC1 (FREAC3, ARA, IGDA, IHG1)
FOXC2 (MFH-1)
AGCUUAU 0.681 hsa-miR-21
hsa-miR-590-5p
CAGUGCA 0.678 hsa-miR-148a
hsa-miR-148b
hsa-miR-152
EWSR1-FLI1.p2 0.671 FLI1 (EWSR2, SIC-1)
EWSR1 (EWS, K984G1.4)
GAUUGUC 0.670 hsa-miR-219-5p
hsa-miR-4782-3p
POU3F1..4.p2 0.661 POU3F1 (OCT6, SCIP)
POU3F3 (BRN1, OTF8)
POU3F2 (POUF3, BRN2, OCT7)
POU3F4 (BRN4, OTF9)
GGCAAGA 0.658 hsa-miR-31
GCUACAU 0.644 hsa-miR-221
hsa-miR-222
AGUGGUU 0.641 hsa-miR-140-5p
AACAGUC 0.631 hsa-miR-132
hsa-miR-212
AIRE.p2 0.624 AIRE (PGA1, APS1)
CUCCCAA 0.622 hsa-miR-150
ACAGUAC 0.618 hsa-miR-101
GGAAGAC 0.599 hsa-miR-7
ATF2.p2 0.590 ATF2 (TREB7, CRE-BP1, HB16)
UUGGUCC 0.584 hsa-miR-133a
hsa-miR-133b
TAL1_TCF{3,4,12}.p2 0.575 TCF3 (E2A, ITF1, MGC129647, MGC129648, bHLHb21)
TCF4 (SEF2-1B, ITF2, bHLHb19)
TAL1 (SCL, bHLHa17)
TCF12 (HEB, HTF4, HsT17266, bHLHb20)
NFIL3.p2 0.567 NFIL3 (E4BP4, NFIL3A, NF-IL3A)
GCAGCAU 0.565 hsa-miR-103a
hsa-miR-107
RORA.p2 0.562 RORA (RZRA, ROR1, ROR2, ROR3, NR1F1)
PDX1.p2 0.557 PDX1 (IDX-1, STF-1, PDX-1, MODY4)
AR.p2 0.543 AR (AIS, NR3C4, SMAX1, HUMARA)
UUGGCAC 0.542 hsa-miR-96
hsa-miR-1271
AUGGCAC 0.537 hsa-miR-183
AUGUGCC 0.530 hsa-miR-455-5p
UCACAUU 0.511 hsa-miR-23a
hsa-miR-23b
hsa-miR-23c
ARID5B.p2 0.508 ARID5B (FLJ21150, MRF2)
AAUGCCC 0.506 hsa-miR-365
UAAGACG 0.501 hsa-miR-208a
hsa-miR-208b
NR6A1.p2 0.483 NR6A1 (GCNF1, RTR)
ACCCUGU 0.479 hsa-miR-10a
hsa-miR-10b
UAAUGCU 0.477 hsa-miR-155
GAGAACU 0.463 hsa-miR-146a
hsa-miR-146b-5p
GAUCAGA 0.451 hsa-miR-383
PAX6.p2 0.432 PAX6 (D11S812E, AN, WAGR)
UAAGACU 0.431 hsa-miR-499-5p
VSX1,2.p2 0.430 VSX2 (RET1)
VSX1 (PPD)
AAUCUCU 0.422 hsa-miR-216b
GUAACAG 0.410 hsa-miR-194
CUX2.p2 0.409 CUX2 (KIAA0293, CDP2)
CCAGCAU 0.399 hsa-miR-338-3p
GAGAUGA 0.387 hsa-miR-143
hsa-miR-4770
ACUGCAU 0.385 hsa-miR-217
HOXA9_MEIS1.p2 0.368 MEIS1
HOXA9
GGACGGA 0.368 hsa-miR-184
ACUGGCC 0.367 hsa-miR-193a-3p
hsa-miR-193b
AUGACAC 0.357 hsa-miR-425
UGACCUA 0.330 hsa-miR-192
hsa-miR-215
CUACAGU 0.315 hsa-miR-139-5p
AACGGAA 0.310 hsa-miR-191
CGUGUCU 0.276 hsa-miR-187
AAUCUCA 0.270 hsa-miR-216a
AACCUGG 0.254 hsa-miR-490-3p
GGAGUGU 0.248 hsa-miR-122
GAUAUGU 0.198 hsa-miR-190
hsa-miR-190b
UGUGCGU 0.191 hsa-miR-210
CGUACCG 0.186 hsa-miR-126
GZF1.p2 0.177 GZF1 (dJ322G13.2, ZBTB23)
PAX8.p2 0.177 PAX8
AACCGUU 0.095 hsa-miR-451
PAX3,7.p2 0.070 PAX7 (Hup1)
PAX3 (HUP2)
ACCCGUA 0.026 hsa-miR-99a
hsa-miR-99b
hsa-miR-100

All samples sorted alphabetically


Your email address:
Project name:

Sample name Condition Replicate/Batch
ki_1_0_trimmed
ki_1_15_trimmed
ki_1_180_trimmed
ki_1_300_trimmed
ki_1_40_trimmed
ki_1_90_trimmed
ki_2_0_trimmed
ki_2_15_trimmed
ki_2_180_trimmed
ki_2_300_trimmed
ki_2_40_trimmed
ki_2_90_trimmed
ki_3_0_trimmed
ki_3_15_trimmed
ki_3_180_trimmed
ki_3_300_trimmed
ki_3_40_trimmed
ki_3_90_trimmed
ko_2_0_trimmed
ko_2_15_trimmed
ko_2_180_trimmed
ko_2_300_trimmed
ko_2_40_trimmed
ko_2_90_trimmed
ko_3_0_trimmed
ko_3_15_trimmed
ko_3_180_trimmed
ko_3_300_trimmed
ko_3_40_trimmed
ko_3_90_trimmed
ko_4_0_trimmed
ko_4_15_trimmed
ko_4_180_trimmed
ko_4_300_trimmed
ko_4_40_trimmed
ko_4_90_trimmed
konost_1_300_trimmed
konost_2_300_trimmed
konost_3_300_trimmed
pten_2_0_trimmed
pten_2_15_trimmed
pten_2_180_trimmed
pten_2_300_trimmed
pten_2_40_trimmed
pten_2_90_trimmed
pten_3_0_trimmed
pten_3_15_trimmed
pten_3_180_trimmed
pten_3_300_trimmed
pten_3_40_trimmed
pten_3_90_trimmed
pten_4_0_trimmed
pten_4_15_trimmed
pten_4_180_trimmed
pten_4_300_trimmed
pten_4_40_trimmed
pten_4_90_trimmed
wt_2_0_trimmed
wt_2_15_trimmed
wt_2_180_trimmed
wt_2_300_trimmed
wt_2_40_trimmed
wt_2_90_trimmed
wt_3_15_trimmed
wt_3_180_trimmed
wt_3_300_trimmed
wt_3_90_trimmed
wt_3b_0_trimmed
wt_3b_40_trimmed
wt_4_0_trimmed
wt_4_15_trimmed
wt_4_180_trimmed
wt_4_300_trimmed
wt_4_90_trimmed
wt_4b_40_trimmed