Motif ID: LHX3,4.p2

Z-value: 1.023


Transcription factors associated with LHX3,4.p2:

Gene SymbolEntrez IDGene Name
LHX3 8022 LIM homeobox 3
LHX4 89884 LIM homeobox 4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
LHX3hg19_v1_chr9_-_139094886_1390950900.439.7e-05Click!
LHX4hg19_v1_chr1_+_180199432_1801994410.334.3e-03Click!


Activity profile for motif LHX3,4.p2.

activity profile for motif LHX3,4.p2


Sorted Z-values histogram for motif LHX3,4.p2

Sorted Z-values for motif LHX3,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of LHX3,4.p2

PNG image of the network

In order to view interactive SVG image please either update your browser to latest version or install SVG plugin.


View svg image
View png image


Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr15_+_25281105 16.133 SNRPN
small nuclear ribonucleoprotein polypeptide N
chr8_-_7212868 10.185 FAM66B
family with sequence similarity 66, member B
chr5_+_59784004 9.502 PART1
prostate androgen-regulated transcript 1 (non-protein coding)
chr12_-_10282680 8.271 NM_022570
NM_197947
NM_197948
NM_197949
NM_197950
NM_197954
CLEC7A





C-type lectin domain family 7, member A





chr16_+_82660390 7.758 NM_001220488
NM_001220489
NM_001220490
NM_001220491
NM_001220492
NM_001257
CDH13





cadherin 13, H-cadherin (heart)





chr13_+_53602829 7.705 NM_006418
OLFM4
olfactomedin 4
chr4_+_69313166 6.576 NM_014058
TMPRSS11E
transmembrane protease, serine 11E
chr11_-_26593667 5.920 NM_001135091
NM_001135092
NM_145650
MUC15


mucin 15, cell surface associated


chr1_-_160924530 5.839 NM_080878
ITLN2
intelectin 2
chr1_-_153283166 5.280 NM_052891
PGLYRP3
peptidoglycan recognition protein 3
chr11_-_71524890 5.215 LOC285407
asparagine-linked glycosylation 1 homolog pseudogene
chr6_+_136172802 5.204 NM_018945
PDE7B
phosphodiesterase 7B
chr15_+_25068793 5.127 NM_022806
NM_022807
NM_022808
SNRPN


small nuclear ribonucleoprotein polypeptide N


chr12_-_42983412 5.047 NM_153026
PRICKLE1
prickle homolog 1 (Drosophila)
chr3_-_99833348 5.036 NM_001042459
NM_182909
FILIP1L

filamin A interacting protein 1-like

chr3_-_64211111 4.741 NM_198859
PRICKLE2
prickle homolog 2 (Drosophila)
chr7_+_129984629 4.389 NM_001127441
NM_001127442
NM_080385
CPA5


carboxypeptidase A5


chr9_+_12693385 4.205 NM_000550
TYRP1
tyrosinase-related protein 1
chr2_-_99871569 4.065 NM_175735
LYG2
lysozyme G-like 2
chr7_+_23286420 4.026 GPNMB
glycoprotein (transmembrane) nmb
chr6_-_66289696 3.871 NM_198283
EYS
eyes shut homolog (Drosophila)
chr5_-_111093792 3.851 NM_001142477
NM_001142476
C5orf13

chromosome 5 open reading frame 13

chr7_-_92777657 3.831 NM_152703
SAMD9L
sterile alpha motif domain containing 9-like
chr7_+_23286401 3.610 GPNMB
glycoprotein (transmembrane) nmb
chr7_+_23286384 3.442 GPNMB
glycoprotein (transmembrane) nmb
chr5_-_160279045 3.414 NM_025153
ATP10B
ATPase, class V, type 10B
chr4_-_120243257 3.402 NM_000134
FABP2
fatty acid binding protein 2, intestinal
chr1_+_152974222 3.287 NM_001097589
NM_005416
SPRR3

small proline-rich protein 3

chrX_-_102531673 3.255 NM_001012979
TCEAL5
transcription elongation factor A (SII)-like 5
chr12_-_16760935 3.219 NM_001001395
NM_001243609
LMO3

LIM domain only 3 (rhombotin-like 2)

chr10_-_50396380 3.219 NM_001010863
C10orf128
chromosome 10 open reading frame 128
chr5_+_55149149 3.214 NM_001242636
NM_001242639
IL31RA

interleukin 31 receptor A

chr15_+_25230199 3.171 PAR5
Prader-Willi/Angelman syndrome-5
chr21_-_31588242 3.165 NM_199328
CLDN8
claudin 8
chr7_-_14025826 3.157 NM_001163150
NM_001163151
NM_001163152
ETV1


ets variant 1


chr3_-_158390266 3.114 NM_020169
LXN
latexin
chr5_+_140557370 3.057 NM_019120
PCDHB8
protocadherin beta 8
chr7_+_23286386 2.949 GPNMB
glycoprotein (transmembrane) nmb
chr11_+_99426872 2.897 NM_175566
CNTN5
contactin 5
chr7_+_23286390 2.862 GPNMB
glycoprotein (transmembrane) nmb
chr11_+_89392464 2.837 NM_153696
FOLH1B
folate hydrolase 1B
chr2_+_202047620 2.805 NM_001206524
NM_001206542
NM_001230
NM_032974
NM_032976
NM_032977
CASP10





caspase 10, apoptosis-related cysteine peptidase





chr2_+_166326156 2.793 NM_001172173
CSRNP3
cysteine-serine-rich nuclear protein 3
chr1_-_115632047 2.742 NM_005725
TSPAN2
tetraspanin 2
chr5_-_124080773 2.698 NM_020747
ZNF608
zinc finger protein 608
chr12_+_8332789 2.690 FAM66C
family with sequence similarity 66, member C
chr9_-_138531385 2.662 NM_182974
GLT6D1
glycosyltransferase 6 domain containing 1
chr19_-_51920841 2.641 NM_001171156
NM_001171157
NM_001171158
NM_001171159
NM_001171160
NM_001171161
NM_033130
SIGLEC10






sialic acid binding Ig-like lectin 10






chr1_-_153321021 2.584 NM_020393
PGLYRP4
peptidoglycan recognition protein 4
chr6_-_31088195 2.581 NM_001264
CDSN
corneodesmosin
chr18_+_29769986 2.553 NM_005925
MEP1B
meprin A, beta
chr1_+_155853546 2.521 SYT11
synaptotagmin XI
chr3_+_132036276 2.521 ACPP
acid phosphatase, prostate
chr5_+_147691988 2.503 NM_032566
SPINK7
serine peptidase inhibitor, Kazal type 7 (putative)
chr6_+_29555682 2.490 NM_007160
OR2H2
olfactory receptor, family 2, subfamily H, member 2
chr4_-_57547845 2.435 NM_001145460
NM_032495
NM_139212
HOPX


HOP homeobox


chr1_-_152131703 2.420 NM_001122965
RPTN
repetin
chr6_+_73076431 2.419 NM_001168411
RIMS1
regulating synaptic membrane exocytosis 1
chr7_-_87342569 2.411 NM_000927
ABCB1
ATP-binding cassette, sub-family B (MDR/TAP), member 1
chr13_-_36050758 2.324 NM_005584
MAB21L1
mab-21-like 1 (C. elegans)
chr12_+_109551041 2.315


chr1_+_43253660 2.315 NM_001242750
LOC100129924
uncharacterized LOC100129924
chr4_+_71019903 2.291 NM_214711
C4orf40
chromosome 4 open reading frame 40
chr18_-_45663667 2.277 NM_001039360
ZBTB7C
zinc finger and BTB domain containing 7C
chr9_-_95298251 2.271 NM_001197295
NM_001197296
NM_001393
ECM2


extracellular matrix protein 2, female organ and adipocyte specific


chr1_-_144997110 2.263 NM_001195260
PDE4DIP
phosphodiesterase 4D interacting protein
chr9_+_118916069 2.244 NM_002581
PAPPA
pregnancy-associated plasma protein A, pappalysin 1
chr11_-_88781039 2.244 NM_001143831
GRM5
glutamate receptor, metabotropic 5
chr3_-_108672547 2.234 NM_005459
GUCA1C
guanylate cyclase activator 1C
chr1_+_198608216 2.211 PTPRC
protein tyrosine phosphatase, receptor type, C
chr9_-_215892 2.144 NM_152569
C9orf66
chromosome 9 open reading frame 66
chr5_+_60933635 2.123 NM_173667
C5orf64
chromosome 5 open reading frame 64
chr1_+_100111430 2.100 NM_017734
PALMD
palmdelphin
chr3_+_132036210 2.097 NM_001099
NM_001134194
ACPP

acid phosphatase, prostate

chr19_+_9296269 2.051 NM_175883
OR7D2
olfactory receptor, family 7, subfamily D, member 2
chr13_-_46425756 2.019 NM_198849
SIAH3
seven in absentia homolog 3 (Drosophila)
chr9_+_90497740 1.998 NM_178828
C9orf79
chromosome 9 open reading frame 79
chr8_+_32785485 1.974


chr1_+_174417211 1.966 NM_005684
GPR52
G protein-coupled receptor 52
chr2_+_234826042 1.946 NM_024080
TRPM8
transient receptor potential cation channel, subfamily M, member 8
chr5_-_88119604 1.936 NM_001193348
NM_001193349
MEF2C

myocyte enhancer factor 2C

chr4_+_88529680 1.936 NM_014208
DSPP
dentin sialophosphoprotein
chr17_+_37784750 1.933 NM_001242464
NM_181505
PPP1R1B

protein phosphatase 1, regulatory (inhibitor) subunit 1B

chr12_+_18414473 1.931 NM_004570
PIK3C2G
phosphoinositide-3-kinase, class 2, gamma polypeptide
chr11_+_22689653 1.931 NM_177553
GAS2
growth arrest-specific 2
chr12_+_9980076 1.928 NM_016523
KLRF1
killer cell lectin-like receptor subfamily F, member 1
chr10_+_90484300 1.926 NM_001080518
LIPK
lipase, family member K
chr7_-_25268057 1.906 NM_022150
NPVF
neuropeptide VF precursor
chr3_-_146324002 1.898 NM_001085420
PLSCR5
phospholipid scramblase family, member 5
chr19_-_22193720 1.898 NM_007153
ZNF208
zinc finger protein 208
chr2_+_202047803 1.890 CASP10
caspase 10, apoptosis-related cysteine peptidase
chr10_+_90521162 1.883 NM_001102469
LIPN
lipase, family member N
chr21_+_43619798 1.870 NM_207627
NM_207628
ABCG1

ATP-binding cassette, sub-family G (WHITE), member 1

chr3_+_186739643 1.860 NM_003032
ST6GAL1
ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
chr10_+_18549583 1.845 NM_000724
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr22_-_22863504 1.843 NM_080764
ZNF280B
zinc finger protein 280B
chr10_+_695887 1.839 C10orf108
chromosome 10 open reading frame 108
chr2_+_162272892 1.837 TBR1
T-box, brain, 1
chr8_-_132052834 1.827 NM_001115
ADCY8
adenylate cyclase 8 (brain)
chr6_-_2635297 1.793 NM_152554
C6orf195
chromosome 6 open reading frame 195
chr11_-_27742224 1.790 NM_001143805
NM_001143806
NM_170732
BDNF


brain-derived neurotrophic factor


chr5_+_53751430 1.752 NM_006308
HSPB3
heat shock 27kDa protein 3
chr5_+_140227356 1.738 NM_014005
NM_031857
PCDHA9

protocadherin alpha 9

chr15_+_48483866 1.736 NM_001145668
CTXN2
SLC12A1
cortexin 2
solute carrier family 12 (sodium/potassium/chloride transporters), member 1
chr20_+_16728997 1.735 NM_020157
OTOR
otoraplin
chr10_-_48806862 1.732 NM_001042357
NM_001042389
PTPN20B
PTPN20A
protein tyrosine phosphatase, non-receptor type 20B
protein tyrosine phosphatase, non-receptor type 20A
chrX_-_18690187 1.723 NM_000330
RS1
retinoschisin 1
chr12_-_16430618 1.717 NM_001170798
SLC15A5
solute carrier family 15, member 5
chr7_-_44580857 1.715 NM_001101648
NM_013389
NPC1L1

NPC1 (Niemann-Pick disease, type C1, gene)-like 1

chr7_-_122339186 1.713 NM_139175
RNF133
ring finger protein 133
chr1_+_177140062 1.711 FAM5B
family with sequence similarity 5, member B
chr17_+_74463629 1.707 NM_001088
AANAT
aralkylamine N-acetyltransferase
chr13_+_113301357 1.694 NM_207440
C13orf35
chromosome 13 open reading frame 35
chrX_-_15332680 1.663 NM_001012428
ASB11
ankyrin repeat and SOCS box containing 11
chr9_-_75567915 1.634 ALDH1A1
aldehyde dehydrogenase 1 family, member A1
chr12_-_53600999 1.628 NM_000889
ITGB7
integrin, beta 7
chr14_+_92788924 1.612 NM_153648
SLC24A4
solute carrier family 24 (sodium/potassium/calcium exchanger), member 4
chr19_+_56270506 1.607 NM_001145014
RFPL4A
ret finger protein-like 4A
chr7_+_23286277 1.594 NM_001005340
NM_002510
GPNMB

glycoprotein (transmembrane) nmb

chr3_-_54961961 1.594 NM_020678
LRTM1
leucine-rich repeats and transmembrane domains 1
chr5_+_36606667 1.593 SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr3_+_132318980 1.586 NM_178445
CCRL1
chemokine (C-C motif) receptor-like 1
chr2_-_134179325 1.577 NCKAP5
NCK-associated protein 5
chr21_-_31538970 1.575 NM_012131
CLDN17
claudin 17
chr5_+_36606456 1.571 NM_001166696
NM_004172
SLC1A3

solute carrier family 1 (glial high affinity glutamate transporter), member 3

chr4_-_68829143 1.567 NM_001114387
NM_182606
TMPRSS11A

transmembrane protease, serine 11A

chr1_-_103496768 1.565 COL11A1
collagen, type XI, alpha 1
chr5_-_22853435 1.559 CDH12
cadherin 12, type 2 (N-cadherin 2)
chrX_-_55057408 1.549 NM_000032
NM_001037967
NM_001037968
ALAS2


aminolevulinate, delta-, synthase 2


chr7_-_14029641 1.545 NM_001163147
NM_004956
ETV1

ets variant 1

chr2_+_169926084 1.543 DHRS9
dehydrogenase/reductase (SDR family) member 9
chr1_-_150738292 1.543 NM_001199739
NM_004079
CTSS

cathepsin S

chr4_-_65275000 1.523 NM_001010874
TECRL
trans-2,3-enoyl-CoA reductase-like
chr14_-_74025643 1.522 NM_001220484
NM_203309
HEATR4

HEAT repeat containing 4

chr10_+_29577989 1.507 NM_032517
LYZL1
lysozyme-like 1
chr6_+_47749774 1.500 NM_181744
OPN5
opsin 5
chr18_+_28956739 1.499 NM_001134453
NM_177986
DSG4

desmoglein 4

chr2_+_170366211 1.498 NM_006063
KBTBD10
kelch repeat and BTB (POZ) domain containing 10
chr2_+_166095911 1.492 NM_001040142
SCN2A
sodium channel, voltage-gated, type II, alpha subunit
chr3_+_82035288 1.490


chr12_-_9760481 1.479 NM_002258
KLRB1
killer cell lectin-like receptor subfamily B, member 1
chrX_+_153533408 1.471 NM_001145934
TKTL1
transketolase-like 1
chr1_+_63063186 1.466 NM_014495
ANGPTL3
angiopoietin-like 3
chr17_-_9923204 1.463 GAS7
growth arrest-specific 7
chr9_-_95166827 1.460 NM_014057
NM_033014
OGN

osteoglycin

chr11_-_128807712 1.454 NM_001195194
TP53AIP1
tumor protein p53 regulated apoptosis inducing protein 1
chr1_+_160370363 1.447 NM_020335
VANGL2
vang-like 2 (van gogh, Drosophila)
chr15_+_34261088 1.442 NM_012125
CHRM5
cholinergic receptor, muscarinic 5
chr15_+_58430394 1.442 NM_020980
AQP9
aquaporin 9
chr8_-_86253863 1.439 NM_001164830
CA1
carbonic anhydrase I
chr12_-_26277807 1.432 NM_030762
BHLHE41
basic helix-loop-helix family, member e41
chr1_+_168545710 1.431 NM_002995
XCL1
chemokine (C motif) ligand 1
chr11_-_20181869 1.420 NM_001029865
DBX1
developing brain homeobox 1
chr14_+_62462540 1.420 NM_031914
SYT16
synaptotagmin XVI
chr12_+_54348683 1.416 NM_173860
HOXC12
homeobox C12
chr5_+_166711842 1.416 NM_001122679
ODZ2
odz, odd Oz/ten-m homolog 2 (Drosophila)
chr6_-_167797917 1.408 NM_004610
TCP10
t-complex 10 homolog (mouse)
chr6_+_123317377 1.405 CLVS2
clavesin 2
chr6_+_152011630 1.390 NM_001122742
ESR1
estrogen receptor 1
chr4_-_100273831 1.388 NM_000669
ADH1C
alcohol dehydrogenase 1C (class I), gamma polypeptide
chr16_+_12058963 1.386 NM_001192
TNFRSF17
tumor necrosis factor receptor superfamily, member 17
chr5_-_156485969 1.371 NM_001173393
HAVCR1
hepatitis A virus cellular receptor 1
chr3_+_113616317 1.362 NM_001172105
GRAMD1C
GRAM domain containing 1C
chr5_+_140247767 1.359 NM_018902
NM_031861
PCDHA11

protocadherin alpha 11

chr1_-_150738255 1.359 CTSS
cathepsin S
chr16_-_71610948 1.355 NM_000353
TAT
tyrosine aminotransferase
chr14_-_71001731 1.354 NM_003814
ADAM20
ADAM metallopeptidase domain 20
chr11_-_16497917 1.352 NM_033326
SOX6
SRY (sex determining region Y)-box 6
chr7_+_37723378 1.350


chr2_-_175712276 1.349 NM_001206602
CHN1
chimerin (chimaerin) 1
chr5_+_147582338 1.349 NM_001195290
NM_205841
SPINK6

serine peptidase inhibitor, Kazal type 6

chr12_-_52946734 1.348 NM_033448
KRT71
keratin 71
chr15_-_50558161 1.341 NM_002112
HDC
histidine decarboxylase
chr12_-_52225700 1.340 NM_001013690
FIGNL2
fidgetin-like 2
chr10_-_48390873 1.334 NM_002900
RBP3
retinol binding protein 3, interstitial
chr10_+_18689512 1.334 NM_201570
CACNB2
calcium channel, voltage-dependent, beta 2 subunit
chr6_+_167584080 1.333 NM_001145121
TCP10L2
t-complex 10-like 2 (mouse)
chr6_-_29527701 1.325 NM_006398
UBD
ubiquitin D
chr12_-_53601051 1.323 ITGB7
integrin, beta 7
chr3_+_151451703 1.322 NM_207365
AADACL2
arylacetamide deacetylase-like 2
chr18_-_3845295 1.315 NM_001003809
NM_001242765
NM_001242766
DLGAP1


discs, large (Drosophila) homolog-associated protein 1


chr3_-_133648517 1.302 NM_025041
C3orf36
chromosome 3 open reading frame 36
chr6_-_22297729 1.290 NM_000948
PRL
prolactin
chrX_+_50027539 1.289 NM_033031
NM_033670
CCNB3

cyclin B3

chr8_+_22210311 1.283 PIWIL2
piwi-like 2 (Drosophila)
chr15_-_99057610 1.277 NM_182562
FAM169B
family with sequence similarity 169, member B
chrY_+_4924128 1.269 NM_032972
NM_032973
PCDH11X
PCDH11Y

protocadherin 11 X-linked
protocadherin 11 Y-linked

chrX_-_132162297 1.265 NM_031907
USP26
ubiquitin specific peptidase 26
chr6_+_12716887 1.260 PHACTR1
phosphatase and actin regulator 1
chr3_-_112564789 1.254 NM_001008784
NM_001199215
CD200R1L

CD200 receptor 1-like

chr17_+_28268622 1.250 NM_198529
EFCAB5
EF-hand calcium binding domain 5
chr5_-_156486128 1.245 HAVCR1
hepatitis A virus cellular receptor 1
chr1_-_154178783 1.245 NM_001010979
C1orf189
chromosome 1 open reading frame 189
chr3_+_46919235 1.242 NM_000316
PTH1R
parathyroid hormone 1 receptor
chr5_+_36608430 1.233 NM_001166695
SLC1A3
solute carrier family 1 (glial high affinity glutamate transporter), member 3
chr20_-_34025955 1.230 NM_000557
GDF5
growth differentiation factor 5
chrX_-_10851808 1.225 NM_033290
MID1
midline 1 (Opitz/BBB syndrome)
chr3_+_151591428 1.223 NM_033050
SUCNR1
succinate receptor 1
chr5_+_140235594 1.222 NM_018901
NM_031859
NM_031860
PCDHA10


protocadherin alpha 10


chr2_+_162272800 1.220 TBR1
T-box, brain, 1

Gene Ontology Analysis

Gene overrepresentation in process category:

Enrichment   P-value GO Accession GO Term
4.66 6.04e-04 GO:0016337 cell-cell adhesion
3.04 8.36e-04 GO:0007155 cell adhesion
3.04 8.36e-04 GO:0022610 biological adhesion
5.95 1.48e-02 GO:0007156 homophilic cell adhesion
6.19 3.25e-02 GO:0051606 detection of stimulus
37.12 3.63e-02 GO:0000270 peptidoglycan metabolic process
37.12 3.63e-02 GO:0009253 peptidoglycan catabolic process

Gene overrepresentation in compartment category:

Enrichment   P-value GO Accession GO Term
2.09 1.03e-04 GO:0005576 extracellular region

Nothing significant found in function category.