ISMARA results: pten_2_0

Sample name: pten_2_0_trimmed

Sorted Z-values histogram for the sample pten_2_0_trimmed

Sorted z-values for every WM.

WM name	Z-value	Associated genes	Logo
NRF1.p2	7.956	NRF1
NFY{A,B,C}.p2	5.683	NFYC NFYB NFYA
ZNF143.p2	4.540	ZNF143
IRF1,2,7.p3	3.213	IRF1 IRF2 IRF7
EHF.p2	3.179	EHF
CTCF.p2	3.036	CTCF
HNF4A_NR2F1,2.p2	2.897	NR2F1 NR2F2 HNF4A
YY1.p2	2.800	YY1
ELK1,4_GABP{A,B1}.p3	2.629	GABPA GABPB1 ELK4 ELK1	$logo of ELK1,4_GABP{A,B1}.p3$
HMGA1,2.p2	2.508	HMGA1 HMGA2
MAZ.p2	2.426	MAZ
SP1.p2	2.416	SP1
POU2F1..3.p2	2.346	POU2F2 POU2F1 POU2F3
FOX{D1,D2}.p2	2.318	FOXD2 FOXD1
CREB1.p2	2.258	CREB1
KLF4.p3	2.154	KLF4
NFKB1_REL_RELA.p2	2.138	RELA REL NFKB1
KLF12.p2	2.134	KLF12
TFAP4.p2	2.105	TFAP4
ZBTB16.p2	2.058	ZBTB16
NR5A1,2.p2	1.976	NR5A1 NR5A2
LMO2.p2	1.895	LMO2
GUAGUGU	1.884
NR4A2.p2	1.842	NR4A2
ZNF384.p2	1.840	ZNF384
TFEB.p2	1.833	TFEB
ADNP_IRX_SIX_ZHX.p2	1.733	SIX5 ZHX1 IRX4 ADNP ZHX3 ZHX2 IRX5 SIX2
HBP1_HMGB_SSRP1_UBTF.p2	1.728	HMGB2 HMGB3 SSRP1 UBTF HBP1
SNAI1..3.p2	1.700	SNAI2 SNAI1 SNAI3
NFE2L2.p2	1.612	NFE2L2
PPARG.p2	1.566	PPARG
TGIF1.p2	1.474	TGIF1
SREBF1,2.p2	1.355	SREBF1 SREBF2
TFAP2B.p2	1.334	TFAP2B
UAUUGCU	1.332
STAT5{A,B}.p2	1.304	STAT5B STAT5A
CAGCAGG	1.241
PBX1.p2	1.236	PBX1
HLF.p2	1.215	HLF
CCUUCAU	1.190
AGUGCAA	1.188
NR1H4.p2	1.153	NR1H4
CDC5L.p2	1.097	CDC5L
NKX2-1,4.p2	1.055	NKX2-1 NKX2-4
UUGUUCG	1.054
ELF1,2,4.p2	1.033	ELF2 ELF1 ELF4
PITX1..3.p2	1.018	PITX2 PITX3 PITX1
AAGGCAC	1.015
MYBL2.p2	1.001	MYBL2
EN1,2.p2	0.989	EN1 EN2
AGCAGCA	0.989
PRDM1.p3	0.987	PRDM1
NFIX.p2	0.973	NFIX
ETS1,2.p2	0.948	ETS2 ETS1
GATA1..3.p2	0.910	GATA1 GATA2 GATA3
AGCUGCC	0.891
HOX{A5,B5}.p2	0.835	HOXB5 HOXA5
PRRX1,2.p2	0.822	PRRX2 PRRX1
CAGUGCA	0.820
GTF2A1,2.p2	0.813	GTF2A1 GTF2A2
PAX4.p2	0.801	PAX4
ESRRA.p2	0.782	ESRRA
GCUGGUG	0.775
PAX2.p2	0.772	PAX2
FOXN1.p2	0.756	FOXN1
CRX.p2	0.749	CRX
FOXO1,3,4.p2	0.747	FOXO1 FOXO4 FOXO3
RXRG_dimer.p3	0.711	NR1H2 RXRA PPARG PPARA RXRB RXRG
UUUUUGC	0.696
RFX1..5_RFXANK_RFXAP.p2	0.695	RFX1 RFXAP RFX5 RFXANK RFX4 RFX3 RFX2
AAGGUGC	0.674
HNF1A.p2	0.654	HNF1A
T.p2	0.640	T
ATF2.p2	0.639	ATF2
NFIL3.p2	0.639	NFIL3
AUUGCAC	0.604
ACAGUAC	0.582
GGAAUGU	0.574
NFE2.p2	0.567	NFE2
FOSL2.p2	0.564	FOSL2
XBP1.p3	0.559	XBP1
MSX1,2.p2	0.530	MSX1 MSX2
ACUGGCC	0.526
UUGGCAC	0.521
UCACAGU	0.517
GGCAAGA	0.501
JUN.p2	0.497	JUN JUND JUNB
AIRE.p2	0.497	AIRE
MYOD1.p2	0.476	MYOD1
POU1F1.p2	0.474	POU1F1
NR3C1.p2	0.465	NR3C1
UGUGCUU	0.463
AGGUAGU	0.450
CCCUGAG	0.449
UAAUGCU	0.438
MZF1.p2	0.430	MZF1
NANOG{mouse}.p2	0.430	NANOG
TP53.p2	0.409	TP53
AAUGCCC	0.408
AUGGCAC	0.405
RORA.p2	0.398	RORA
UCCCUUU	0.396
CCAGCAU	0.382
CUCCCAA	0.345
ONECUT1,2.p2	0.335	ONECUT2 ONECUT1
SOX5.p2	0.326	SOX5
FOXQ1.p2	0.321	FOXQ1
GAGGUAG	0.306
GUAACAG	0.302
GGCUCAG	0.286
VSX1,2.p2	0.279	VSX2 VSX1
ZIC1..3.p2	0.271	ZIC1 ZIC2 ZIC3
AACACUG	0.243
GGACGGA	0.235
EGR1..3.p2	0.234	EGR3 EGR1 EGR2
DMAP1_NCOR{1,2}_SMARC.p2	0.227	SMARCA1 SMARCC2 SMARCA5 NCOR1 NCOR2 DMAP1	$logo of DMAP1_NCOR{1,2}_SMARC.p2$
MAFB.p2	0.226	MAFB
RXR{A,B,G}.p2	0.222	RXRA RXRB RXRG
SRY.p2	0.220	SRY
GGCAGUG	0.217
PATZ1.p2	0.212	PATZ1
CUX2.p2	0.195	CUX2
TBX4,5.p2	0.187	TBX5 TBX4
NKX2-2,8.p2	0.180	NKX2-2 NKX2-8
FOXA2.p3	0.155	FOXA2
UGCAUAG	0.149
SMAD1..7,9.p2	0.148	SMAD5 SMAD1 SMAD3 SMAD4 SMAD2 SMAD6 SMAD7 SMAD9
ALX1.p2	0.123	ALX1
PAX8.p2	0.116	PAX8
AR.p2	0.109	AR
ACUGCAU	0.095
CUACAGU	0.095
GCUACAU	0.090
PAX3,7.p2	0.077	PAX7 PAX3
AAGUGCU	0.075
CGUACCG	0.068
GCAGCAU	0.065
AACGGAA	0.064
AGCACCA	0.061
AACCUGG	0.058
TAL1_TCF{3,4,12}.p2	0.055	TCF3 TCF4 TAL1 TCF12	$logo of TAL1_TCF{3,4,12}.p2$
GZF1.p2	0.037	GZF1
MEF2{A,B,C,D}.p2	0.024	MEF2A MEF2C MEF2D MEF2BNB-MEF2B MEF2B
UUGGCAA	0.013
HOXA9_MEIS1.p2	0.004	MEIS1 HOXA9
ACCCGUA	0.003
UGUGCGU	-0.001
UCAAGUA	-0.009
CGUGUCU	-0.018
GAUCAGA	-0.034
AACCGUU	-0.046
GAUAUGU	-0.053
UGACCUA	-0.053
ZNF423.p2	-0.060	ZNF423
AGUGGUU	-0.069
EVI1.p2	-0.071	EVI1
AGCUUAU	-0.075
GTF2I.p2	-0.081	GTF2I
FOXL1.p2	-0.098	FOXL1
ACCCUGU	-0.099
ZBTB6.p2	-0.116	ZBTB6
AUGACAC	-0.123
AACAGUC	-0.129
TEAD1.p2	-0.142	TEAD1 TEAD2 TEAD3 TEAD4
TLX2.p2	-0.143	TLX2
ZNF148.p2	-0.145	ZNF148
UCACAUU	-0.147
ATF5_CREB3.p2	-0.150	ATF5 CREB3
NR6A1.p2	-0.154	NR6A1
POU5F1.p2	-0.183	POU5F1
UAAGACU	-0.189
HIF1A.p2	-0.195	HIF1A
GAGAUGA	-0.203
NHLH1,2.p2	-0.229	NHLH1 NHLH2
ATF6.p2	-0.234	ATF6
STAT1,3.p3	-0.237	STAT1 STAT3
AAUCUCA	-0.243
NKX6-1,2.p2	-0.276	NKX6-1 NKX6-2
HMX1.p2	-0.285	HMX1
NANOG.p2	-0.291	NANOG
HOX{A4,D4}.p2	-0.294	HOXA4 HOXD4
IKZF1.p2	-0.300	IKZF1
EBF1.p2	-0.306	EBF1
NKX3-1.p2	-0.314	NKX3-1
FOXP3.p2	-0.316	FOXP3
UAAGACG	-0.340
AGCAGCG	-0.341
GGAGUGU	-0.346
AAUCUCU	-0.346
UCCAGUU	-0.364
GGAAGAC	-0.373
RXRA_VDR{dimer}.p2	-0.383	VDR	$logo of RXRA_VDR{dimer}.p2$
PDX1.p2	-0.389	PDX1
GAUUGUC	-0.390
TFCP2.p2	-0.401	TFCP2
UGCAUUG	-0.405
SOX{8,9,10}.p2	-0.409	SOX9 SOX8 SOX10
AAUACUG	-0.411
ACAUUCA	-0.416
POU3F1..4.p2	-0.431	POU3F1 POU3F3 POU3F2 POU3F4
LHX3,4.p2	-0.435	LHX3 LHX4
UUGGUCC	-0.472
FOXD3.p2	-0.483	FOXD3
SOX17.p2	-0.484	SOX17
ATF4.p2	-0.495	ATF4
CCAGUGU	-0.533
AUGGCUU	-0.580
NKX3-2.p2	-0.587	NKX3-2
PAX6.p2	-0.631	PAX6
BPTF.p2	-0.641	BPTF
EOMES.p2	-0.646	EOMES
AUGUGCC	-0.653
STAT2,4,6.p2	-0.682	STAT2 STAT4 STAT6
EP300.p2	-0.700	EP300
SPZ1.p2	-0.700	SPZ1
TCF4_dimer.p2	-0.706	TCF4
EWSR1-FLI1.p2	-0.714	FLI1 EWSR1
GUCAGUU	-0.722
GAGAACU	-0.730
ARNT_ARNT2_BHLHB2_MAX_MYC_USF1.p2	-0.747	ARNT MAX MYC USF1 BHLHB2 ARNT2
CEBPA,B_DDIT3.p2	-0.751	DDIT3 CEBPA CEBPB
GATA6.p2	-0.757	GATA6
RBPJ.p2	-0.778	RBPJ
GFI1.p2	-0.783	GFI1
GUGCAAA	-0.799
GFI1B.p2	-0.813	GFI1B
TFAP2{A,C}.p2	-0.837	TFAP2C TFAP2A
FOX{I1,J2}.p2	-0.845	FOXI1 FOXJ2
IKZF2.p2	-0.874	IKZF2
POU6F1.p2	-0.875	POU6F1
FOX{C1,C2}.p2	-0.885	FOXC1 FOXC2
ACAGUAU	-0.907
ARID5B.p2	-0.948	ARID5B
CDX1,2,4.p2	-0.966	CDX1 CDX2 CDX4
DBP.p2	-0.983	DBP
HES1.p2	-1.004	HES1
GUAAACA	-1.039
MYB.p2	-1.075	MYB
ZFP161.p2	-1.081	ZFP161
CUUUGGU	-1.138
REST.p3	-1.168	REST
RUNX1..3.p2	-1.179	RUNX1 RUNX3 RUNX2
ESR1.p2	-1.190	ESR1
AAAGUGC	-1.196
CACAGUG	-1.199
TLX1..3_NFIC{dimer}.p2	-1.260	TLX1 TLX3	$logo of TLX1..3_NFIC{dimer}.p2$
NFE2L1.p2	-1.305	NFE2L1
UGAAAUG	-1.347
PAX5.p2	-1.351	PAX5
BACH2.p2	-1.378	BACH2
ZNF238.p2	-1.439	ZNF238
HOX{A6,A7,B6,B7}.p2	-1.493	HOXB6 HOXA7 HOXB7 HOXA6
POU5F1_SOX2{dimer}.p2	-1.532	POU5F1 SOX2	$logo of POU5F1_SOX2{dimer}.p2$
FOX{F1,F2,J1}.p2	-1.543	FOXF2 FOXJ1 FOXF1
ZEB1.p2	-1.574	ZEB1
HSF1,2.p2	-1.661	HSF1 HSF2
bHLH_family.p2	-1.711	ARNTL MITF MXI1 TFE3 CLOCK OLIG2 MXD4 HEY2 HEY1 HEYL MLXIPL HES6 MXD3 ARNTL2 ID1 MNT OLIG1 NPAS2
LEF1_TCF7_TCF7L1,2.p2	-1.805	TCF7 TCF7L2 LEF1 TCF7L1
SPI1.p2	-1.886	SPI1
HIC1.p2	-1.946	HIC1
TBP.p2	-1.949	TBP
FEV.p2	-1.976	FEV
HAND1,2.p2	-1.989	HAND1 HAND2
SOX2.p2	-2.022	SOX2
NKX2-3_NKX2-5.p2	-2.046	NKX2-5 NKX2-3
FOS_FOS{B,L1}_JUN{B,D}.p2	-2.144	FOS JUNB FOSL1 JUND FOSB	$logo of FOS_FOS{B,L1}_JUN{B,D}.p2$
MYFfamily.p2	-2.233	MYOD1 MYF6 MYF5 MYOG
MTF1.p2	-2.282	MTF1
GLI1..3.p2	-2.352	GLI1 GLI2 GLI3
SPIB.p2	-2.710	SPIB
E2F1..5.p2	-2.838	E2F4 E2F5 E2F2 E2F1 E2F3
RREB1.p2	-2.871	RREB1
NFATC1..3.p2	-2.969	NFATC3 NFATC2 NFATC1
AHR_ARNT_ARNT2.p2	-2.985	ARNT AHR ARNT2
SRF.p3	-3.686	SRF
TFDP1.p2	-4.439	TFDP1

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Sample name: pten_2_0_trimmed

Sorted z-values for every WM.