Motif ID: CDX1,2,4.p2

Z-value: 1.367


Transcription factors associated with CDX1,2,4.p2:

Gene SymbolEntrez IDGene Name
CDX1 1044 caudal type homeobox 1
CDX2 1045 caudal type homeobox 2
CDX4 1046 caudal type homeobox 4

Activity-expression correlation:

Gene SymbolPromoterPearson corr. coef.P-valuePlot
CDX2hg19_v1_chr13_-_28543143_285432820.152.0e-01Click!


Activity profile for motif CDX1,2,4.p2.

activity profile for motif CDX1,2,4.p2


Sorted Z-values histogram for motif CDX1,2,4.p2

Sorted Z-values for motif CDX1,2,4.p2



Network of associatons between targets according to the STRING database.



First level regulatory network of CDX1,2,4.p2

PNG image of the network

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Top targets:


Promoter Score Refseq Gene Symbol Gene Name
chr1_-_151345156 22.588 NM_003944
SELENBP1
selenium binding protein 1
chr2_-_216242916 20.582 FN1
fibronectin 1
chr3_-_169487602 20.281 NM_032487
ARPM1
actin related protein M1
chr7_-_112726143 17.095 NM_001146266
NM_001146267
GPR85

G protein-coupled receptor 85

chr4_-_76957139 16.502 NM_005409
CXCL11
chemokine (C-X-C motif) ligand 11
chr19_-_52255099 15.150 NM_001193306
NM_002029
FPR1

formyl peptide receptor 1

chr2_-_216241321 14.309 FN1
fibronectin 1
chrX_+_102631267 13.789 NM_206915
NM_206917
NGFRAP1

nerve growth factor receptor (TNFRSF16) associated protein 1

chr3_-_139396773 13.251 NM_001200047
NM_178177
NMNAT3

nicotinamide nucleotide adenylyltransferase 3

chr2_-_216289936 12.993 FN1
fibronectin 1
chr19_-_37701385 12.869 NM_152279
ZNF585B
zinc finger protein 585B
chr3_-_74570262 11.690 NM_020872
CNTN3
contactin 3 (plasmacytoma associated)
chr2_+_132285469 11.151 NM_138770
CCDC74A
coiled-coil domain containing 74A
chr11_-_108368918 10.927 NM_153705
KDELC2
KDEL (Lys-Asp-Glu-Leu) containing 2
chr5_+_35856990 10.728 NM_002185
IL7R
interleukin 7 receptor
chr2_-_130902568 10.663 NM_207310
CCDC74B
coiled-coil domain containing 74B
chr12_+_21679190 10.472 NM_030572
C12orf39
chromosome 12 open reading frame 39
chr2_-_216259197 10.413 FN1
fibronectin 1
chr19_-_19932512 10.285 NM_001099269
NM_001145404
ZNF506

zinc finger protein 506

chr7_-_83270746 9.928 NM_001178129
SEMA3E
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
chr1_-_146697155 9.873 NM_001144829
NM_001144830
NM_001461
FMO5


flavin containing monooxygenase 5


chr13_+_78109808 9.822 NM_001160706
NM_003843
NM_144777
SCEL


sciellin


chr6_-_31648140 9.719 NM_025262
LY6G5C
lymphocyte antigen 6 complex, locus G5C
chr5_+_140165875 9.261 NM_018900
NM_031410
NM_031411
PCDHA1


protocadherin alpha 1


chr3_+_107096187 8.498 NM_032600
CCDC54
coiled-coil domain containing 54
chr5_+_140560979 8.478 NM_020957
PCDHB16
protocadherin beta 16
chr2_-_216249682 8.431 FN1
fibronectin 1
chr4_-_186877869 8.159 NM_021069
SORBS2
sorbin and SH3 domain containing 2
chr17_+_3379295 8.006 NM_000049
ASPA
aspartoacylase
chr2_+_170335948 7.639 NM_152384
BBS5
Bardet-Biedl syndrome 5
chr19_-_44384240 7.507 NM_001033719
ZNF404
zinc finger protein 404
chrX_+_75648045 7.353 NM_020932
MAGEE1
melanoma antigen family E, 1
chr2_-_224866616 7.290 SERPINE2
serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
chr2_+_31456879 7.242 NM_014600
EHD3
EH-domain containing 3
chr19_+_21579884 7.145 NM_001076678
NM_145326
NM_175910
ZNF493


zinc finger protein 493


chr5_-_64777703 7.134 NM_197941
ADAMTS6
ADAM metallopeptidase with thrombospondin type 1 motif, 6
chrX_-_84634664 7.115 POF1B
premature ovarian failure, 1B
chrX_-_84634742 7.048 NM_024921
POF1B
premature ovarian failure, 1B
chr1_+_183155173 6.872 NM_005562
NM_018891
LAMC2

laminin, gamma 2

chr17_-_56606534 6.743 SEPT4
septin 4
chr7_+_6617035 6.642 NM_001134387
NM_001134388
NM_001134389
NM_018106
ZDHHC4



zinc finger, DHHC-type containing 4



chr11_-_102401430 6.579 NM_002423
MMP7
matrix metallopeptidase 7 (matrilysin, uterine)
chr4_+_71384289 6.499 NM_212557
AMTN
amelotin
chr7_-_92777657 6.427 NM_152703
SAMD9L
sterile alpha motif domain containing 9-like
chr19_+_41281281 6.379 NM_006533
MIA
melanoma inhibitory activity
chr9_-_99801924 6.323 NM_001201575
CTSL2
cathepsin L2
chr1_-_110933635 6.271 SLC16A4
solute carrier family 16, member 4 (monocarboxylic acid transporter 5)
chr20_+_58713521 6.259 LOC284757
uncharacterized LOC284757
chr2_-_216245573 6.123 FN1
fibronectin 1
chr2_+_88472657 5.978 NM_018271
THNSL2
threonine synthase-like 2 (S. cerevisiae)
chr1_-_120311466 5.912 NM_001166107
NM_005518
HMGCS2

3-hydroxy-3-methylglutaryl-CoA synthase 2 (mitochondrial)

chr5_+_140480056 5.896 NM_018937
PCDHB3
protocadherin beta 3
chr19_-_11529948 5.719 NM_001035223
NM_001161616
RGL3

ral guanine nucleotide dissociation stimulator-like 3

chr14_+_51026742 5.618 NM_015915
NM_181598
ATL1

atlastin GTPase 1

chr1_+_150480486 5.586 NM_001202858
NM_004425
NM_022664
ECM1


extracellular matrix protein 1


chr22_-_17302555 5.568 NM_175878
XKR3
XK, Kell blood group complex subunit-related family, member 3
chr1_-_110933683 5.564 NM_001201546
NM_001201547
NM_001201548
NM_001201549
NM_004696
SLC16A4




solute carrier family 16, member 4 (monocarboxylic acid transporter 5)




chr5_-_24645084 5.515 NM_006727
CDH10
cadherin 10, type 2 (T2-cadherin)
chr11_-_104916041 5.489 NM_001017534
NM_052889
CARD16

caspase recruitment domain family, member 16

chr21_+_42797977 5.480 NM_002462
NM_001178046
MX1

myxovirus (influenza virus) resistance 1, interferon-inducible protein p78 (mouse)

chr17_+_7942351 5.419 NM_001039130
NM_001039131
NM_001141
ALOX15B


arachidonate 15-lipoxygenase, type B


chrX_-_84634396 5.394 POF1B
premature ovarian failure, 1B
chr1_-_51787881 5.335 NM_001080494
TTC39A
tetratricopeptide repeat domain 39A
chr1_+_209878135 5.265 NM_005525
HSD11B1
hydroxysteroid (11-beta) dehydrogenase 1
chr10_+_95848811 5.258 NM_001165979
PLCE1
phospholipase C, epsilon 1
chr9_+_131870105 5.177


chr4_-_76944585 5.175 NM_001565
CXCL10
chemokine (C-X-C motif) ligand 10
chr5_-_124080773 5.138 NM_020747
ZNF608
zinc finger protein 608
chr8_-_7212868 5.122 FAM66B
family with sequence similarity 66, member B
chr16_+_55515468 4.998 NM_001127891
MMP2
matrix metallopeptidase 2 (gelatinase A, 72kDa gelatinase, 72kDa type IV collagenase)
chr17_-_33775761 4.942 NM_144682
SLFN13
schlafen family member 13
chr12_-_133532847 4.941 NM_183238
NM_001164715
ZNF605

zinc finger protein 605

chr4_-_186578122 4.880 NM_001145674
NM_001145675
SORBS2

sorbin and SH3 domain containing 2

chr2_+_24272583 4.871 NM_004116
NM_054033
FKBP1B

FK506 binding protein 1B, 12.6 kDa

chr5_+_147582338 4.842 NM_001195290
NM_205841
SPINK6

serine peptidase inhibitor, Kazal type 6

chr16_-_31214003 4.801 PYCARD
PYD and CARD domain containing
chr20_+_123230 4.792 NM_030931
DEFB126
defensin, beta 126
chr12_-_10588543 4.706 NM_002260
KLRC2
KLRC3
killer cell lectin-like receptor subfamily C, member 2
killer cell lectin-like receptor subfamily C, member 3
chr18_+_21452981 4.680 NM_000227
NM_001127718
LAMA3

laminin, alpha 3

chr5_+_53751430 4.612 NM_006308
HSPB3
heat shock 27kDa protein 3
chr7_-_83278478 4.589 NM_012431
SEMA3E
sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E
chr5_+_140247767 4.502 NM_018902
NM_031861
PCDHA11

protocadherin alpha 11

chr1_-_150738255 4.456 CTSS
cathepsin S
chr5_+_140235594 4.336 NM_018901
NM_031859
NM_031860
PCDHA10


protocadherin alpha 10


chr4_-_186577858 4.324 SORBS2
sorbin and SH3 domain containing 2
chr15_+_25068793 4.319 NM_022806
NM_022807
NM_022808
SNRPN


small nuclear ribonucleoprotein polypeptide N


chr1_+_247581350 4.304 NM_001127462
NM_001243133
NM_004895
NM_183395
NLRP3



NLR family, pyrin domain containing 3



chr16_-_31214054 4.219 NM_013258
NM_145182
PYCARD

PYD and CARD domain containing

chr19_+_37342552 4.194 NM_001242475
NM_001242476
ZNF345

zinc finger protein 345

chr5_+_140514787 4.064 NM_015669
PCDHB5
protocadherin beta 5
chr11_-_7961066 4.007 NM_001003745
OR10A3
olfactory receptor, family 10, subfamily A, member 3
chr3_+_57094468 3.953 NM_181727
SPATA12
spermatogenesis associated 12
chr4_+_166299942 3.940 NM_001873
CPE
carboxypeptidase E
chr9_-_86571533 3.835 C9orf64
chromosome 9 open reading frame 64
chr1_+_77333158 3.816 NM_030965
ST6GALNAC5
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
chr2_+_202047620 3.797 NM_001206524
NM_001206542
NM_001230
NM_032974
NM_032976
NM_032977
CASP10





caspase 10, apoptosis-related cysteine peptidase





chr1_+_77333121 3.796 ST6GALNAC5
ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 5
chr20_+_58296264 3.777 NM_183244
NM_183246
PHACTR3

phosphatase and actin regulator 3

chr2_-_47918413 3.769 RPL18A
ribosomal protein L18a
chr7_+_89843133 3.741 NM_001040666
STEAP2
STEAP family member 2, metalloreductase
chr5_+_140571903 3.713 NM_018930
PCDHB10
protocadherin beta 10
chr12_+_133657439 3.693 ZNF140
zinc finger protein 140
chr4_+_69313166 3.658 NM_014058
TMPRSS11E
transmembrane protease, serine 11E
chr12_-_10542616 3.642 NM_007360
KLRK1
killer cell lectin-like receptor subfamily K, member 1
chr12_-_10573041 3.616 NM_002261
NM_007333
KLRC3

killer cell lectin-like receptor subfamily C, member 3

chr2_+_31456981 3.613 EHD3
EH-domain containing 3
chr1_-_205391180 3.603 NM_001001552
NM_001199050
NM_001199051
NM_001199052
LEMD1



LEM domain containing 1



chr20_+_45523247 3.602 NM_005244
NM_172110
EYA2

eyes absent homolog 2 (Drosophila)

chr2_-_216248184 3.599 FN1
fibronectin 1
chr10_-_23633771 3.571 NM_153714
C10orf67
chromosome 10 open reading frame 67
chr12_-_10562142 3.539 NM_013431
KLRC4-KLRK1
KLRC4
KLRC4-KLRK1 readthrough
killer cell lectin-like receptor subfamily C, member 4
chr15_-_45670955 3.481 NM_001482
GATM
glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr3_-_184971815 3.473 NM_001166415
NM_001966
EHHADH

enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase

chr11_+_113258512 3.432 NM_178510
ANKK1
ankyrin repeat and kinase domain containing 1
chr2_-_127963342 3.417 NM_001001665
CYP27C1
cytochrome P450, family 27, subfamily C, polypeptide 1
chr8_-_110620220 3.409 SYBU
syntabulin (syntaxin-interacting)
chr12_+_104659046 3.400 RPL18A
ribosomal protein L18a
chr14_+_51026853 3.384 ATL1
atlastin GTPase 1
chr1_+_28261503 3.327 NM_001009568
NM_014474
SMPDL3B

sphingomyelin phosphodiesterase, acid-like 3B

chr12_+_9142136 3.312 NM_005810
KLRG1
killer cell lectin-like receptor subfamily G, member 1
chr19_-_37341168 3.302 NM_001242801
ZNF790
zinc finger protein 790
chr1_-_23521221 3.280 NM_000864
HTR1D
5-hydroxytryptamine (serotonin) receptor 1D
chr1_+_92632608 3.253 NM_015237
KIAA1107
KIAA1107
chr2_+_38155901 3.230 NM_001170792
FAM82A1
family with sequence similarity 82, member A1
chr1_-_150738232 3.215 CTSS
cathepsin S
chr15_+_25281105 3.199 SNRPN
small nuclear ribonucleoprotein polypeptide N
chr12_+_57157091 3.191 NM_003725
HSD17B6
hydroxysteroid (17-beta) dehydrogenase 6 homolog (mouse)
chr2_-_225811730 3.183 DOCK10
dedicator of cytokinesis 10
chr7_-_73256838 3.178 NM_152559
WBSCR27
Williams Beuren syndrome chromosome region 27
chr15_+_25230199 3.094 PAR5
Prader-Willi/Angelman syndrome-5
chr5_+_140557370 3.083 NM_019120
PCDHB8
protocadherin beta 8
chr6_-_32160637 3.082 GPSM3
G-protein signaling modulator 3
chr6_-_32160289 3.075 GPSM3
G-protein signaling modulator 3
chr5_+_140345746 3.073 NM_018899
PCDHAC2
protocadherin alpha subfamily C, 2
chr1_-_183560010 3.072 NM_001127651
NCF2
neutrophil cytosolic factor 2
chr1_+_40942878 3.071 ZNF642
zinc finger protein 642
chr9_-_86571652 3.031 NM_032307
C9orf64
chromosome 9 open reading frame 64
chr18_+_616671 3.002 NM_199167
CLUL1
clusterin-like 1 (retinal)
chr5_+_68788118 2.975 NM_002538
OCLN
occludin
chr2_-_201967702 2.959


chr3_-_145968819 2.946 PLSCR4
phospholipid scramblase 4
chr3_-_145968958 2.929 NM_001128306
NM_001177304
NM_020353
PLSCR4


phospholipid scramblase 4


chr18_-_29993195 2.924


chr3_-_105421044 2.916 CBLB
Cas-Br-M (murine) ecotropic retroviral transforming sequence b
chr12_-_10562744 2.903 NM_001199805
KLRC4-KLRK1
KLRC4-KLRK1 readthrough
chr20_-_17539480 2.900 NM_001161705
BFSP1
beaded filament structural protein 1, filensin
chr15_-_56388662 2.895 RFX7
regulatory factor X, 7
chr9_-_86082656 2.885 NM_001244960
FRMD3
FERM domain containing 3
chr12_+_1726221 2.867 NM_030775
WNT5B
wingless-type MMTV integration site family, member 5B
chr4_-_177116713 2.857 NM_144644
SPATA4
spermatogenesis associated 4
chr1_-_45956795 2.849 NM_007170
TESK2
testis-specific kinase 2
chr4_-_186456580 2.832 NM_001114107
NM_014476
PDLIM3

PDZ and LIM domain 3

chr10_+_32856650 2.815 NM_024688
C10orf68
chromosome 10 open reading frame 68
chr15_+_42696957 2.796 NM_173089
NM_173090
CAPN3

calpain 3, (p94)

chr2_-_127977653 2.766 CYP27C1
cytochrome P450, family 27, subfamily C, polypeptide 1
chr1_+_197881618 2.727 NM_001014434
LHX9
LIM homeobox 9
chr9_-_86571631 2.675 C9orf64
chromosome 9 open reading frame 64
chr3_-_149086884 2.668 TM4SF1
transmembrane 4 L six family member 1
chr16_+_19467771 2.553 NM_024780
TMC5
transmembrane channel-like 5
chr5_-_111093792 2.543 NM_001142477
NM_001142476
C5orf13

chromosome 5 open reading frame 13

chr9_-_85882093 2.528 NM_001244962
FRMD3
FERM domain containing 3
chr9_+_79115548 2.515 NM_001097636
GCNT1
glucosaminyl (N-acetyl) transferase 1, core 2
chr1_-_183274008 2.509 NM_170706
NMNAT2
nicotinamide nucleotide adenylyltransferase 2
chr12_+_7167979 2.494 NM_001734
NM_201442
C1S

complement component 1, s subcomponent

chr12_+_133657478 2.489 ZNF140
zinc finger protein 140
chr18_-_28681885 2.474 NM_004949
NM_024422
DSC2

desmocollin 2

chr3_-_172241060 2.457 NM_001190943
NM_001190942
NM_003810
TNFSF10


tumor necrosis factor (ligand) superfamily, member 10


chr21_+_30517897 2.432 C21orf7
chromosome 21 open reading frame 7
chr11_+_73358593 2.423 NM_001130034
NM_001130035
PLEKHB1

pleckstrin homology domain containing, family B (evectins) member 1

chr5_+_140588267 2.419 NM_018932
PCDHB12
protocadherin beta 12
chr11_+_114166534 2.407 NM_006169
NNMT
nicotinamide N-methyltransferase
chr14_-_47120940 2.405 NM_080746
RPL10L
ribosomal protein L10-like
chr12_+_95676175 2.390 VEZT
vezatin, adherens junctions transmembrane protein
chr18_+_6834431 2.378 NM_001010000
ARHGAP28
Rho GTPase activating protein 28
chr19_-_12163781 2.374 NM_001080404
ZNF878
zinc finger protein 878
chr5_+_82767492 2.373 NM_001126336
NM_001164097
NM_001164098
NM_004385
VCAN



versican



chr13_+_99058147 2.360


chr4_+_169013687 2.355 NM_007193
ANXA10
annexin A10
chrX_-_154255214 2.346 F8
coagulation factor VIII, procoagulant component
chr17_-_48945338 2.344 NM_001243877
TOB1
transducer of ERBB2, 1
chr1_-_24151932 2.312 NM_000191
NM_001166059
HMGCL

3-hydroxymethyl-3-methylglutaryl-CoA lyase

chrX_+_102192199 2.308 NM_001031834
RAB40AL
RAB40A, member RAS oncogene family-like
chr5_+_140220811 2.287 NM_018911
NM_031856
PCDHA8

protocadherin alpha 8

chr13_+_97928196 2.286 MBNL2
muscleblind-like 2 (Drosophila)
chrX_+_54834107 2.272 NM_177433
MAGED2
melanoma antigen family D, 2
chr13_-_96294282 2.265 DZIP1
DAZ interacting protein 1
chr1_+_84764048 2.261 NM_001010971
SAMD13
sterile alpha motif domain containing 13
chr12_-_10605928 2.254 NM_002259
NM_007328
KLRC1

killer cell lectin-like receptor subfamily C, member 1

chr15_-_45670624 2.245 GATM
glycine amidinotransferase (L-arginine:glycine amidinotransferase)
chr1_+_164528914 2.218 PBX1
pre-B-cell leukemia homeobox 1
chr2_-_122159140 2.207 CLASP1
cytoplasmic linker associated protein 1
chr9_-_28719302 2.207 NM_152570
LINGO2
leucine rich repeat and Ig domain containing 2
chr8_-_124665165 2.199 NM_001081675
KLHL38
kelch-like 38 (Drosophila)
chr6_+_56954978 2.184 ZNF451
zinc finger protein 451
chr5_+_140566655 2.177 NM_019119
PCDHB9
protocadherin beta 9
chr1_-_89591685 2.160 NM_004120
GBP2
guanylate binding protein 2, interferon-inducible
chr8_+_97505895 2.153 SDC2
syndecan 2
chr5_+_140529619 2.152 NM_018939
PCDHB6
protocadherin beta 6
chr14_-_74025643 2.149 NM_001220484
NM_203309
HEATR4

HEAT repeat containing 4

chr1_-_9117554 2.145 SLC2A5
solute carrier family 2 (facilitated glucose/fructose transporter), member 5

Gene Ontology Analysis

Gene overrepresentation in process category:

Enrichment   P-value GO Accession GO Term
8.37 2.57e-10 GO:0007156 homophilic cell adhesion
4.72 2.96e-07 GO:0016337 cell-cell adhesion
2.89 9.92e-06 GO:0007155 cell adhesion
2.89 9.92e-06 GO:0022610 biological adhesion
13.71 3.35e-03 GO:0016339 calcium-dependent cell-cell adhesion
1.56 5.25e-03 GO:0007275 multicellular organismal development
1.62 9.63e-03 GO:0048731 system development
10.28 2.00e-02 GO:0007416 synapse assembly
1.55 2.14e-02 GO:0048856 anatomical structure development
1.47 3.95e-02 GO:0032502 developmental process

Gene overrepresentation in compartment category:

Enrichment   P-value GO Accession GO Term
1.90 2.84e-05 GO:0005576 extracellular region
2.21 4.38e-04 GO:0044421 extracellular region part
3.23 2.27e-03 GO:0005578 proteinaceous extracellular matrix
2.89 6.15e-03 GO:0031012 extracellular matrix
2.06 3.99e-02 GO:0005615 extracellular space

Gene overrepresentation in function category:

Enrichment   P-value GO Accession GO Term
3.06 9.48e-07 GO:0005509 calcium ion binding
1.65 2.10e-06 GO:0046872 metal ion binding
1.63 3.96e-06 GO:0043169 cation binding
1.62 4.55e-06 GO:0043167 ion binding
2.71 3.18e-02 GO:0030246 carbohydrate binding