SRR2034992_GSM1677166_YoungBeta_BIS-Seq_Mus_musculus_Bisulfite-Seq_1_val_1.fq.gz and SRR2034992_GSM1677166_YoungBeta_BIS-Seq_Mus_musculus_Bisulfite-Seq_2_val_2.fq.gz
Data processed at 19:06:37 on 2022-12-14
Alignment Stats
Sequence pairs analysed in total
168603085
Paired-end alignments with a unique best hit
84901243
Pairs without alignments under any condition
62721003
Pairs that did not map uniquely
20980839
Genomic sequence context not extractable (edges of chromosomes)
2
Cytosine Methylation
Total C's analysed
2761757972
Methylated C's in CpG context
183818975
Methylated C's in CHG context
69991458
Methylated C's in CHH context
250674292
Methylated C's in Unknown context
56576
Unmethylated C's in CpG context
63916187
Unmethylated C's in CHG context
647127477
Unmethylated C's in CHH context
1546229583
Unmethylated C's in Unknown context
287613
Percentage methylation (CpG context)
74.2%
Percentage methylation (CHG context)
9.8%
Percentage methylation (CHH context)
14.0%
Methylated C's in Unknown context
N/A%
Alignment to Individual Bisulfite Strands
OT
45574886
original top strand
CTOT
0
complementary to original top strand
CTOB
0
complementary to original bottom strand
OB
39326355
original bottom strand
Deduplication
Alignments analysed
84901241
Unique alignments
41762632
Duplicates removed
43138609
Duplicated alignments were found at 17923915 different positions
