SRR2034988_GSM1677165_OldBeta_BIS-Seq_Mus_musculus_Bisulfite-Seq_1_val_1.fq.gz and SRR2034988_GSM1677165_OldBeta_BIS-Seq_Mus_musculus_Bisulfite-Seq_2_val_2.fq.gz
Data processed at 19:06:36 on 2022-12-14
Alignment Stats
Sequence pairs analysed in total
89547646
Paired-end alignments with a unique best hit
45492827
Pairs without alignments under any condition
36115043
Pairs that did not map uniquely
7939776
Genomic sequence context not extractable (edges of chromosomes)
3
Cytosine Methylation
Total C's analysed
1512440586
Methylated C's in CpG context
79809662
Methylated C's in CHG context
31641705
Methylated C's in CHH context
102167121
Methylated C's in Unknown context
34150
Unmethylated C's in CpG context
29770477
Unmethylated C's in CHG context
383126027
Unmethylated C's in CHH context
885925594
Unmethylated C's in Unknown context
154420
Percentage methylation (CpG context)
72.8%
Percentage methylation (CHG context)
7.6%
Percentage methylation (CHH context)
10.3%
Methylated C's in Unknown context
N/A%
Alignment to Individual Bisulfite Strands
OT
23263096
original top strand
CTOT
0
complementary to original top strand
CTOB
0
complementary to original bottom strand
OB
22229728
original bottom strand
Deduplication
Alignments analysed
45492824
Unique alignments
37406198
Duplicates removed
8086626
Duplicated alignments were found at 4843525 different positions
