FastQCFastQC Report
Tue 2 May 2023
SRR9894854_GSM4005240_NPC48h_DMSO_ATAC_rep1_Mus_musculus_ATAC-seq_1_val_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR9894854_GSM4005240_NPC48h_DMSO_ATAC_rep1_Mus_musculus_ATAC-seq_1_val_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences51096775
Total Bases3.5 Gbp
Sequences flagged as poor quality0
Sequence length20-75
%GC44

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)