FastQCFastQC Report
Tue 2 May 2023
SRR11878621_GSM4579146_mESC_DMSO_ATAC_rep3_Mus_musculus_ATAC-seq_1_val_1.fq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11878621_GSM4579146_mESC_DMSO_ATAC_rep3_Mus_musculus_ATAC-seq_1_val_1.fq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences139228011
Total Bases11.2 Gbp
Sequences flagged as poor quality0
Sequence length20-101
%GC34

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)