FastQCFastQC Report
Tue 2 May 2023
SRR11878620_GSM4579145_mESC_DMSO_ATAC_rep2_Mus_musculus_ATAC-seq_1.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR11878620_GSM4579145_mESC_DMSO_ATAC_rep2_Mus_musculus_ATAC-seq_1.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences170228576
Total Bases17.1 Gbp
Sequences flagged as poor quality0
Sequence length101
%GC37

[OK]Per base sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[OK]Overrepresented sequences

No overrepresented sequences

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)