FastQC Report![[OK]](Icons/tick.png)
Basic Statistics
| Measure | Value |
|---|---|
| Filename | good_sequence_short.txt |
| File type | Conventional base calls |
| Encoding | Illumina 1.5 |
| Total Sequences | 250000 |
| Sequence length | 40 |
| %GC | 45 |
Per base sequence quality
Per sequence quality scores
![[WARN]](Icons/warning.png)
Per base sequence content
Per base GC content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Kmer Content
| Sequence | Count | Obs/Exp Overall | Obs/Exp Max | Max Obs/Exp Position |
|---|---|---|---|---|
| ACACA | 57240 | 5.721922 | 6.5421305 | 29 |
| CACAC | 53180 | 5.051656 | 5.8508105 | 20 |
| GTGTG | 25125 | 4.8563538 | 6.290789 | 21 |
| TGTGT | 27545 | 3.5321136 | 4.4551544 | 1 |
| TTTTC | 53520 | 3.2843091 | 3.9300396 | 35 |
| AGTGG | 14350 | 3.1737597 | 4.334391 | 10 |
| AGAGA | 16305 | 3.13232 | 3.9102898 | 1 |
| CCAGG | 17875 | 3.1008267 | 3.8858092 | 28 |